Databases available for ViroBLAST
- Nucleotide sequence databases
- HIV genbank
- HIV sequence subset of NCBI genbank. The database is updated biweekly.
- Viral genbank
- Viral sequence subset of NCBI genbank. The database is updated biweekly.
- LANL HIV-1 complete genome (yyyy)
- HIV-1 complete genome sequences from LANL. The year in parentheses is the publish year.
- LANL HIV-1 subtype reference (yyyy)
- HIV-1 subtype reference sequences from LANL. The year in parentheses is the publish year.
- LANL HIV-1 consensus & ancestor (yyyy)
- HIV-1 consensus and ancestral sequences from LANL. The year in parentheses is the publish year.
- Vectors
- Non-redundant vector database (UniVec) of NCBI.
- Protein sequence databases
- HIV protein
- HIV protein sequence subset of NCBI genbank. The database is updated biweekly.
- Viral protein
- Viral protein sequence subset of NCBI genbank. The database is updated biweekly.